STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ER57_00480Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (132 aa)    
Predicted Functional Partners:
ER57_00470
Anti-sigma regulatory factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.969
ER57_00460
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.877
ER57_00455
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.876
ER57_00445
NADP oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.827
guaB
Inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
 0.739
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.725
ER57_00465
Serine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.640
ER57_00475
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.567
ER57_11875
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.484
ER57_04125
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.475
Your Current Organism:
Smithella sp. SCADC
NCBI taxonomy Id: 1499107
Other names: S. sp. SCADC, Smithella sp. enrichment culture clone SCADC
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.