ER57_15660 protein (Smithella sp. SCADC) - STRING interaction network

Nodes:

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Cooccurrence

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[Homology]

Score

ER57_15660

Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (454 aa)

Predicted Functional Partners:

ER57_11070

0.941

ER57_18160

0.930

ER57_15665

0.923

ER57_12720

0.905

ER57_02315

0.893

ER57_10370

0.884

ER57_11990

0.856

ER57_13815

0.856

ER57_18445

0.854

ER57_18590

0.812

Your Current Organism:

Smithella sp. SCADC

NCBI taxonomy Id: 1499107
Other names: S. sp. SCADC, Smithella sp. enrichment culture clone SCADC

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ER57_02315	ER57_15660	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.893
ER57_02315	ER57_18445	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.459
ER57_10370	ER57_11070	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.588
ER57_10370	ER57_11990	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.999
ER57_10370	ER57_12720	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ER57_10370	ER57_13815	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.999
ER57_10370	ER57_15660	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.884
ER57_10370	ER57_15665	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.834
ER57_10370	ER57_18160	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ER57_10370	ER57_18445	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
ER57_10370	ER57_18590	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
ER57_11070	ER57_10370	RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.588
ER57_11070	ER57_11990	RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.588
ER57_11070	ER57_12720	RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.779
ER57_11070	ER57_13815	RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.588
ER57_11070	ER57_15660	RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.941
ER57_11070	ER57_15665	RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.688
ER57_11070	ER57_18160	RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.585
ER57_11070	ER57_18445	RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.544
ER57_11070	ER57_18590	RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.552