STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ER57_16315Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (125 aa)    
Predicted Functional Partners:
ER57_16320
CRISPR-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.999
ER57_16325
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.999
ER57_16330
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.999
ER57_16310
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.998
ER57_16305
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.487
ER57_16300
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.478
ER57_16335
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.458
ER57_16340
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.458
ER57_16345
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.457
Your Current Organism:
Smithella sp. SCADC
NCBI taxonomy Id: 1499107
Other names: S. sp. SCADC, Smithella sp. enrichment culture clone SCADC
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.