STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000821245_00942Unannotated protein. (76 aa)    
Predicted Functional Partners:
GCA_000821245_00940
Unannotated protein.
 
 0.999
GCA_000821245_02964
Unannotated protein.
  
 0.999
GCA_000821245_00807
Unannotated protein.
  
 0.998
GCA_000821245_00815
Unannotated protein.
   
 0.998
GCA_000821245_00824
Unannotated protein.
   
 0.998
GCA_000821245_00827
Unannotated protein.
  
 0.998
GCA_000821245_00832
Unannotated protein.
  
 0.998
GCA_000821245_00835
Unannotated protein.
   
 0.998
GCA_000821245_00837
Unannotated protein.
   
 0.998
GCA_000821245_00842
Unannotated protein.
  
 0.998
Your Current Organism:
Virgibacillus senegalensis
NCBI taxonomy Id: 1499679
Other names: CSUR P1101, DSM 28585, V. senegalensis, Virgibacillus sp. SK-1, strain SK-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.