STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000821245_03744Unannotated protein. (425 aa)    
Predicted Functional Partners:
GCA_000821245_03743
Unannotated protein.
  0.991
GCA_000821245_03742
Unannotated protein.
 
  0.964
GCA_000821245_03882
Unannotated protein.
 0.954
GCA_000821245_01608
Unannotated protein.
 
  0.853
GCA_000821245_01686
Unannotated protein.
 
  0.848
GCA_000821245_01609
Unannotated protein.
 
  0.834
GCA_000821245_01446
Unannotated protein.
 
  0.823
GCA_000821245_01685
Unannotated protein.
 
  0.815
GCA_000821245_03330
Unannotated protein.
 
  0.812
GCA_000821245_01389
Unannotated protein.
 
  0.810
Your Current Organism:
Virgibacillus senegalensis
NCBI taxonomy Id: 1499679
Other names: CSUR P1101, DSM 28585, V. senegalensis, Virgibacillus sp. SK-1, strain SK-1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.