STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000821245_03767Unannotated protein. (618 aa)    
Predicted Functional Partners:
GCA_000821245_03768
Unannotated protein.
     
 0.869
GCA_000821245_02112
Unannotated protein.
  
 0.840
GCA_000821245_02113
Unannotated protein.
  
 0.840
GCA_000821245_03440
Unannotated protein.
  
 0.840
GCA_000821245_03611
Unannotated protein.
  
 0.840
GCA_000821245_01346
Unannotated protein.
    
   0.737
GCA_000821245_01347
Unannotated protein.
    
   0.737
GCA_000821245_03005
Unannotated protein.
    
   0.737
GCA_000821245_02939
Unannotated protein.
    
 0.724
GCA_000821245_03070
Unannotated protein.
  
 
 0.681
Your Current Organism:
Virgibacillus senegalensis
NCBI taxonomy Id: 1499679
Other names: CSUR P1101, DSM 28585, V. senegalensis, Virgibacillus sp. SK-1, strain SK-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.