STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDZ93364.1Sensor histidine kinase. (425 aa)    
Predicted Functional Partners:
CDZ93365.1
Two component LuxR family transcriptional regulator.
 
 0.998
agmR
DNA-binding response regulator AgmR.
 
 0.974
gacA
DNA-binding response regulator GacA.
 
 0.969
corR
DNA-binding response regulator CorR.
 
 0.965
erdR
Two-component response regulator.
 
 0.961
CDZ94427.1
Sensory box histidine kinase/response regulator.
  
 0.950
CDZ94103.1
PAS/PAC sensor hybrid histidine kinase.
  
 0.930
CDZ94936.1
Sensory box histidine kinase.
  
 0.923
CDZ93356.1
Two-component sensor.
  
 0.922
CDZ93952.1
Sensory box histidine kinase/response regulator.
 
 0.918
Your Current Organism:
Pseudomonas saudiphocaensis
NCBI taxonomy Id: 1499686
Other names: CSUR P1224, P. saudiphocaensis, Pseudomonas sp. 20_BN, strain 20_BN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.