STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDZ95049.1Alpha/beta hydrolase. (292 aa)    
Predicted Functional Partners:
CDZ95048.1
Transcriptional regulator.
       0.549
CDZ93637.1
acyl-CoA thioesterase II.
 
     0.417
rpmB
50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
 
     0.409
Your Current Organism:
Pseudomonas saudiphocaensis
NCBI taxonomy Id: 1499686
Other names: CSUR P1224, P. saudiphocaensis, Pseudomonas sp. 20_BN, strain 20_BN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.