STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRK81332.1Para-nitrobenzyl esterase. (286 aa)    
Predicted Functional Partners:
nuoI
NADH dehydrogenase subunit I.
   
   0.804
CRK80621.1
Cytochrome caa3 oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
    
  0.800
CRK81931.1
Oxidoreductase, with Rieske iron-sulfur protein 2Fe-2S subunit.
  
  0.785
CRK81897.1
Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
  0.724
CRK84543.1
Alpha/beta hydrolase fold-3 domain-containing protein.
  
     0.722
CRK84611.1
AraC family transcriptional regulator.
  
 
  0.684
qcrA
Rieske (2Fe-2S) domain-containing protein.
    
  0.663
kynU
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.
  
 
 0.636
kynA
Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety.
  
 
 0.620
CRK83130.1
Alpha/beta hydrolase.
  
     0.591
Your Current Organism:
Bacillus sp. LF1
NCBI taxonomy Id: 1499688
Other names: B. sp. LF1
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