STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRK82005.1Two-component response regulator YxjM. (223 aa)    
Predicted Functional Partners:
CRK83726.1
Sporulation kinase.
 
 0.987
CRK82004.1
Two-component sensor histidine kinase YxjL.
 0.977
yhcY
Two-component sensor histidine kinase.
 
 0.956
nreB
Two-component sensor histidine kinase of nitrate reduction.
 
 0.950
CRK83214.1
Integral membrane sensor signal transduction histidine kinase.
  0.902
CRK81365.1
Signal transduction histidine kinase.
 
 0.900
degS
DegS; Member of the two-component regulatory system DegS/DegU, which plays an important role in the transition growth phase.
  0.898
CRK81543.1
Sensory transduction protein kinase.
 
 0.898
liaS
Two-component sensor histidine kinase LiaS.
 
  0.898
CRK80732.1
Two-component sensor histidine kinase.
 
 0.887
Your Current Organism:
Bacillus sp. LF1
NCBI taxonomy Id: 1499688
Other names: B. sp. LF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.