STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccoP2Cbb3-type cytochrome c oxidase subunit CcoP2. (217 aa)    
Predicted Functional Partners:
CRK81526.1
SirA family protein; Belongs to the sulfur carrier protein TusA family.
  
 0.993
CRK83596.1
Hypothetical protein.
  
 0.978
CRK80621.1
Cytochrome caa3 oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 
 0.890
fadF
Ferredoxin, 4Fe-4S.
    
 0.877
CRK82739.1
Cytochrome c class I.
  
 
 0.867
CRK81402.1
Cytochrome c class I.
  
 
 0.851
cccA
Cytochrome c-550.
  
 
 0.851
hom
Homoserine dehydrogenase.
  
 0.849
CRK81700.1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
  
 
 0.846
CRK82565.1
Hypothetical protein.
  
 
 0.846
Your Current Organism:
Bacillus sp. LF1
NCBI taxonomy Id: 1499688
Other names: B. sp. LF1
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