STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000753435_01314Unannotated protein. (232 aa)    
Predicted Functional Partners:
GCA_000753435_01312
Unannotated protein.
 
 0.999
GCA_000753435_01313
Unannotated protein.
 
 
 0.999
GCA_000753435_00047
Unannotated protein.
  
 0.981
GCA_000753435_00048
Unannotated protein.
  
 0.981
GCA_000753435_02573
Unannotated protein.
  
  
  0.938
GCA_000753435_00444
Unannotated protein.
     
 0.931
GCA_000753435_01110
Unannotated protein.
   
 
  0.928
GCA_000753435_02790
Unannotated protein.
   
 
  0.928
GCA_000753435_00098
Unannotated protein.
  
  
  0.926
GCA_000753435_01344
Unannotated protein.
    
  0.926
Your Current Organism:
Clostridium amazonitimonense
NCBI taxonomy Id: 1499689
Other names: C. amazonitimonense, CSUR P1445, Clostridium sp. LF2, DSM 28600, strain LF2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.