STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U14_00176Glycosyl hydrolase family 88. (313 aa)    
Predicted Functional Partners:
kduI
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase 1; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
   
 0.798
U14_05542
Glycosyl hydrolase family 32 domain protein.
  
  
  0.694
U14_05142
Glycoside hydrolase, family 31; Belongs to the glycosyl hydrolase 31 family.
 
  
 0.670
U14_05225
APHP domain protein.
    
 0.655
U14_03456
Glycosyl hydrolase family 88.
  
     0.654
U14_03454
Beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
 
  
  0.634
U14_04782
Alpha-galactosidase.
    
 0.632
U14_04098
Carbohydrate-binding family 9.
    
 0.629
U14_01106
Hypothetical protein.
  
 
 0.628
U14_03772
Beta-galactosidase; Belongs to the glycosyl hydrolase 35 family.
  
 
 0.628
Your Current Organism:
Moduliflexus flocculans
NCBI taxonomy Id: 1499966
Other names: C. Moduliflexus flocculans, Candidatus Moduliflexus flocculans, bacterium UASB14
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