STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylBHypothetical protein. (498 aa)    
Predicted Functional Partners:
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
 
 
 0.939
rhaA
L-rhamnose isomerase; Belongs to the rhamnose isomerase family.
  
 
 0.863
rhaA-2
L-rhamnose isomerase; Belongs to the rhamnose isomerase family.
  
 
 0.863
U14_05502
L-ribulose-5-phosphate 4-epimerase.
 
 0.852
U14_02409
Class II aldolase/adducin family protein.
 
 
 0.851
U14_02628
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
 
  
 0.837
U14_05766
Class II aldolase/adducin family protein.
  
 
 0.832
U14_01684
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
 
  
 0.827
U14_03960
Phosphoenolpyruvate-protein phosphotransferase.
   
 
 0.778
U14_04009
Phosphocarrier protein HPr.
    
 
 0.754
Your Current Organism:
Moduliflexus flocculans
NCBI taxonomy Id: 1499966
Other names: C. Moduliflexus flocculans, Candidatus Moduliflexus flocculans, bacterium UASB14
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