STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsAABC transporter-related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (502 aa)    
Predicted Functional Partners:
U14_00648
Monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 0.932
U14_04039
Ribose ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 0.913
U14_05729
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 0.893
U14_01701
Probable sugar ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 0.890
U14_05282
Monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 0.887
U14_03263
Monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 0.886
U14_00646
Monosaccharide-transporting ATPase.
  
 0.885
U14_03636
Transporter; Belongs to the binding-protein-dependent transport system permease family.
 0.885
U14_01559
Monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 0.883
U14_01700
Ribose ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 0.879
Your Current Organism:
Moduliflexus flocculans
NCBI taxonomy Id: 1499966
Other names: C. Moduliflexus flocculans, Candidatus Moduliflexus flocculans, bacterium UASB14
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