STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U14_00883Tfp pilus assembly protein PilF. (599 aa)    
Predicted Functional Partners:
U14_02808
Hypothetical protein.
  
 0.778
U14_02692
Amino acid adenylation domain protein.
   
 0.718
U14_05546
NcpB protein; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 0.718
U14_00311
Hypothetical protein.
 
 
 0.679
U14_05376
Glycosyl transferase family 2.
  
 0.663
U14_00532
Methyltransferase type 11.
   
 0.658
U14_00470
Glycosyl transferase family 2.
   
 0.644
U14_00797
Putative methyltransferase.
   
 0.644
U14_01130
3-demethylubiquinone-9 3-methyltransferase.
   
 0.636
U14_02706
Putative methyltransferase.
   
 0.636
Your Current Organism:
Moduliflexus flocculans
NCBI taxonomy Id: 1499966
Other names: C. Moduliflexus flocculans, Candidatus Moduliflexus flocculans, bacterium UASB14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.