STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U14_00944PAS modulated sigma54 specific transcriptional regulator, Fis family. (588 aa)    
Predicted Functional Partners:
U14_00945
Putative Histidine kinase.
   
0.917
U14_00946
Signal transduction histidine kinase.
    
 0.917
U14_04005
RNA polymerase, sigma 54 subunit, RpoN.
 
  
 0.904
U14_00948
Sensor protein.
    
0.815
U14_00949
Putative Histidine kinase.
   
0.806
U14_00943
Response regulator receiver protein.
    
 0.778
U14_00880
Multi-sensor signal transduction histidine kinase.
 
  
 0.759
U14_03340
GAF sensor signal transduction histidine kinase.
  
 0.739
U14_01610
Signal transduction histidine kinase, nitrogen specific, NtrB.
 
  
 0.723
U14_04320
Multi-sensor signal transduction histidine kinase domain protein.
 
  
 0.722
Your Current Organism:
Moduliflexus flocculans
NCBI taxonomy Id: 1499966
Other names: C. Moduliflexus flocculans, Candidatus Moduliflexus flocculans, bacterium UASB14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.