STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U14_01705Transcriptional regulator, RpiR family. (293 aa)    
Predicted Functional Partners:
U14_04626
Phosphomannose isomerase.
  
 
 0.854
U14_05820
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase.
 
  
 0.755
U14_04530
Glycoside hydrolase family 4.
 
 
 0.694
U14_02606
Putative alpha-galactosidase.
 
 
 0.692
U14_05380
Glucose-6-phosphate isomerase.
 
  
  0.678
U14_01669
Aldehyde dehydrogenase.
  
 
 0.666
U14_03968
Chloride channel core.
   
  
 0.666
U14_00290
Acetaldehyde dehydrogenase.
  
 
 0.662
U14_00104
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.660
zwf
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
    
 0.657
Your Current Organism:
Moduliflexus flocculans
NCBI taxonomy Id: 1499966
Other names: C. Moduliflexus flocculans, Candidatus Moduliflexus flocculans, bacterium UASB14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.