STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U14_02850Iron-sulfur cluster-binding oxidoreductase. (219 aa)    
Predicted Functional Partners:
U14_05548
Iron-sulfur cluster-binding protein.
 
 
 0.723
U14_02101
Formate dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 0.713
U14_04432
Putative electron-transferring subunit of iron-only hydrogenase.
  
 
 0.685
rnfB
Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 
 0.682
U14_03538
Anaerobic sulfite reductase subunit C; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
  
  0.673
U14_02237
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.655
U14_00847
4Fe-4S ferredoxin iron-sulfur binding domain protein.
  
 
 0.650
U14_02833
Hypothetical protein.
  
 
 0.650
cysC
Sulfate adenylyltransferase subunit 1; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
    
 0.572
U14_02106
Von Willebrand factor type A.
  
  
 0.562
Your Current Organism:
Moduliflexus flocculans
NCBI taxonomy Id: 1499966
Other names: C. Moduliflexus flocculans, Candidatus Moduliflexus flocculans, bacterium UASB14
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