STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U14_02867Hypothetical protein ANT_03690. (410 aa)    
Predicted Functional Partners:
U14_00101
Carboxylesterase type B; Belongs to the type-B carboxylesterase/lipase family.
  
 0.975
U14_04932
Hypothetical protein.
    
 0.873
U14_00609
Ferroxidase; Iron-storage protein.
    
 0.773
U14_04733
Putative membrane protein.
   
 0.742
U14_05845
Hypothetical protein.
   
 0.735
U14_02504
Putative TPR-domain containing protein.
   
 0.646
U14_04120
Hypothetical protein.
    
 0.642
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]
   
    0.640
U14_01871
Peptidase, S8A (Subtilisin) family; Belongs to the peptidase S8 family.
     
 0.598
U14_03809
Protease C2; Belongs to the peptidase S8 family.
     
 0.598
Your Current Organism:
Moduliflexus flocculans
NCBI taxonomy Id: 1499966
Other names: C. Moduliflexus flocculans, Candidatus Moduliflexus flocculans, bacterium UASB14
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