STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U14_03188Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B. (270 aa)    
Predicted Functional Partners:
U14_05179
Pirin domain protein; Belongs to the pirin family.
 
  
 0.828
U14_04679
2-hydroxypenta-2,4-dienoate hydratase.
  
  
 0.771
U14_02515
Putative 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase protein; Belongs to the HpcH/HpaI aldolase family.
  
  
 0.737
U14_05083
Predicted iron-sulfur flavoprotein.
  
 
 0.700
U14_01999
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family.
 
 
 0.683
U14_03497
Hypothetical protein.
 
  
 0.681
U14_00104
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.673
U14_00290
Acetaldehyde dehydrogenase.
  
 
 0.673
U14_01669
Aldehyde dehydrogenase.
  
 
 0.673
U14_00178
Hypothetical protein.
    
 0.647
Your Current Organism:
Moduliflexus flocculans
NCBI taxonomy Id: 1499966
Other names: C. Moduliflexus flocculans, Candidatus Moduliflexus flocculans, bacterium UASB14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.