Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| U14_00269 | rbsD | U14_00269 | U14_03479 | Periplasmic binding protein/LacI transcriptional regulator. | D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. | 0.927 |
| U14_00269 | rbsK | U14_00269 | U14_03478 | Periplasmic binding protein/LacI transcriptional regulator. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.619 |
| U14_00646 | rbsD | U14_00646 | U14_03479 | Monosaccharide-transporting ATPase. | D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. | 0.915 |
| U14_00646 | rbsK | U14_00646 | U14_03478 | Monosaccharide-transporting ATPase. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.560 |
| U14_01695 | U14_02377 | U14_01695 | U14_02377 | Ribose ABC transporter, periplasmic ribose-binding protein. | Hypothetical protein. | 0.760 |
| U14_01695 | U14_03233 | U14_01695 | U14_03233 | Ribose ABC transporter, periplasmic ribose-binding protein. | ABC transporter substrate binding protein (Ribose). | 0.720 |
| U14_01695 | U14_03483 | U14_01695 | U14_03483 | Ribose ABC transporter, periplasmic ribose-binding protein. | Periplasmic binding protein/LacI transcriptional regulator. | 0.728 |
| U14_01695 | U14_05284 | U14_01695 | U14_05284 | Ribose ABC transporter, periplasmic ribose-binding protein. | D-ribose ABC transporter, substrate-binding protein. | 0.767 |
| U14_01695 | rbsD | U14_01695 | U14_03479 | Ribose ABC transporter, periplasmic ribose-binding protein. | D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. | 0.924 |
| U14_01695 | rbsK | U14_01695 | U14_03478 | Ribose ABC transporter, periplasmic ribose-binding protein. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.481 |
| U14_02377 | U14_01695 | U14_02377 | U14_01695 | Hypothetical protein. | Ribose ABC transporter, periplasmic ribose-binding protein. | 0.760 |
| U14_02377 | rbsD | U14_02377 | U14_03479 | Hypothetical protein. | D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. | 0.914 |
| U14_02377 | rbsK | U14_02377 | U14_03478 | Hypothetical protein. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.526 |
| U14_03233 | U14_01695 | U14_03233 | U14_01695 | ABC transporter substrate binding protein (Ribose). | Ribose ABC transporter, periplasmic ribose-binding protein. | 0.720 |
| U14_03233 | U14_05284 | U14_03233 | U14_05284 | ABC transporter substrate binding protein (Ribose). | D-ribose ABC transporter, substrate-binding protein. | 0.774 |
| U14_03233 | rbsD | U14_03233 | U14_03479 | ABC transporter substrate binding protein (Ribose). | D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. | 0.867 |
| U14_03233 | rbsK | U14_03233 | U14_03478 | ABC transporter substrate binding protein (Ribose). | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.411 |
| U14_03483 | U14_01695 | U14_03483 | U14_01695 | Periplasmic binding protein/LacI transcriptional regulator. | Ribose ABC transporter, periplasmic ribose-binding protein. | 0.728 |
| U14_03483 | rbsD | U14_03483 | U14_03479 | Periplasmic binding protein/LacI transcriptional regulator. | D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. | 0.931 |
| U14_03483 | rbsK | U14_03483 | U14_03478 | Periplasmic binding protein/LacI transcriptional regulator. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.636 |
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