STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U14_04241Acetoacetate metabolism regulatory protein atoC. (456 aa)    
Predicted Functional Partners:
U14_01610
Signal transduction histidine kinase, nitrogen specific, NtrB.
  
 0.968
U14_03042
Signal transduction histidine kinase.
  
 0.931
U14_01889
CheA signal transduction histidine kinase.
  
 0.903
U14_00535
CheA signal transduction histidine kinases.
  
 0.895
U14_00912
Two-component system sensory/regulatory protein, Che family.
  
 0.895
U14_01122
Two-component system sensory/regulatory protein, Che family.
  
 0.895
U14_03627
CheA signal transduction histidine kinases.
  
 0.895
U14_03984
Two-component system sensory/regulatory protein-like, Che family protein.
  
 0.895
U14_04651
Response regulator receiver domain protein.
  
 0.887
U14_04005
RNA polymerase, sigma 54 subunit, RpoN.
 
  
 0.882
Your Current Organism:
Moduliflexus flocculans
NCBI taxonomy Id: 1499966
Other names: C. Moduliflexus flocculans, Candidatus Moduliflexus flocculans, bacterium UASB14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.