STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U14_04521Glycosyl hydrolase family protein. (458 aa)    
Predicted Functional Partners:
U14_04522
Cupin 2, conserved barrel domain protein.
 
     0.847
U14_04524
Short-chain dehydrogenase/reductase SDR.
 
   
 0.841
U14_04523
Oxidoreductase domain protein.
 
  
  0.788
U14_04532
Oxidoreductase domain protein.
  
  
  0.765
U14_03661
Conserved predicted protein.
 
 
 0.739
U14_01106
Hypothetical protein.
 
 
 0.685
U14_02680
Carboxymethylenebutenolidase.
 
  
  0.680
U14_01298
Alpha-rhamnosidase.
 
  
  0.672
U14_05225
APHP domain protein.
    
 0.655
U14_02008
Oxidoreductase domain protein.
  
  
  0.654
Your Current Organism:
Moduliflexus flocculans
NCBI taxonomy Id: 1499966
Other names: C. Moduliflexus flocculans, Candidatus Moduliflexus flocculans, bacterium UASB14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.