U14_04667 protein (Moduliflexus flocculans) - STRING interaction network

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second shell of interactors

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Edges:

Edges represent protein-protein associations

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

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[Homology]

Score

U14_04667

Hypothetical protein. (404 aa)

Predicted Functional Partners:

U14_04669

0.953

U14_04668

0.947

U14_01107

0.686

U14_05182

0.662

U14_01992

0.657

U14_00325

0.641

U14_01344

0.641

U14_02908

0.641

U14_05429

0.641

U14_05566

0.639

Your Current Organism:

Moduliflexus flocculans

NCBI taxonomy Id: 1499966
Other names: C. Moduliflexus flocculans, Candidatus Moduliflexus flocculans, bacterium UASB14

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
U14_00325	U14_01344	Undecaprenyl-phosphate glucose phosphotransferase.	Putative Undecaprenyl-phosphate glucose phosphotransferase.	0.947
U14_00325	U14_02908	Undecaprenyl-phosphate glucose phosphotransferase.	RfbP protein.	0.945
U14_00325	U14_04667	Undecaprenyl-phosphate glucose phosphotransferase.	Hypothetical protein.	0.641
U14_00325	U14_05182	Undecaprenyl-phosphate glucose phosphotransferase.	Putative glycosyltransferase Cps7F.	0.832
U14_01107	U14_01992	Hypothetical protein.	Mucin 2, intestinal/tracheal.	0.679
U14_01107	U14_04667	Hypothetical protein.	Hypothetical protein.	0.686
U14_01344	U14_00325	Putative Undecaprenyl-phosphate glucose phosphotransferase.	Undecaprenyl-phosphate glucose phosphotransferase.	0.947
U14_01344	U14_02908	Putative Undecaprenyl-phosphate glucose phosphotransferase.	RfbP protein.	0.947
U14_01344	U14_04667	Putative Undecaprenyl-phosphate glucose phosphotransferase.	Hypothetical protein.	0.641
U14_01344	U14_05182	Putative Undecaprenyl-phosphate glucose phosphotransferase.	Putative glycosyltransferase Cps7F.	0.836
U14_01992	U14_01107	Mucin 2, intestinal/tracheal.	Hypothetical protein.	0.679
U14_01992	U14_04667	Mucin 2, intestinal/tracheal.	Hypothetical protein.	0.657
U14_01992	U14_05566	Mucin 2, intestinal/tracheal.	Hypothetical protein, fragment.	0.670
U14_02908	U14_00325	RfbP protein.	Undecaprenyl-phosphate glucose phosphotransferase.	0.945
U14_02908	U14_01344	RfbP protein.	Putative Undecaprenyl-phosphate glucose phosphotransferase.	0.947
U14_02908	U14_04667	RfbP protein.	Hypothetical protein.	0.641
U14_02908	U14_05182	RfbP protein.	Putative glycosyltransferase Cps7F.	0.835
U14_04667	U14_00325	Hypothetical protein.	Undecaprenyl-phosphate glucose phosphotransferase.	0.641
U14_04667	U14_01107	Hypothetical protein.	Hypothetical protein.	0.686
U14_04667	U14_01344	Hypothetical protein.	Putative Undecaprenyl-phosphate glucose phosphotransferase.	0.641

page 1 of 2

Network Stats

number of nodes:

11

number of edges:

23

average node degree:

4.18

avg. local clustering coefficient:

0.789

expected number of edges:

10

PPI enrichment p-value:

0.000345

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0006084

acetyl-CoA metabolic process

4 of 12

2.07

2.54

6.33e-06

GO:0006086

acetyl-CoA biosynthetic process from pyruvate

3 of 3

2.55

2.45

2.64e-05

GO:0006090

Pyruvate metabolic process

4 of 21

1.83

2.06

3.14e-05

GO:0009150

Purine ribonucleotide metabolic process

7 of 91

1.44

2.0

5.10e-07

GO:0006096

Glycolytic process

3 of 13

1.91

1.66

0.00043

(more ...)

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0016624

Oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor

4 of 5

2.45

2.89

3.16e-06

GO:0016417

S-acyltransferase activity

3 of 6

2.25

1.82

0.00034

GO:0004739

Pyruvate dehydrogenase (acetyl-transferring) activity

2 of 3

2.38

1.02

0.0135

GO:0016746

Acyltransferase activity

4 of 133

1.03

0.56

0.0366

GO:0016491

Oxidoreductase activity

6 of 345

0.79

0.5

0.0194

(more ...)

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:1990204

Oxidoreductase complex

6 of 23

1.97

3.55

6.41e-09

GO:0045252

Oxoglutarate dehydrogenase complex

2 of 2

2.55

1.52

0.0016

GO:0005622

Intracellular anatomical structure

10 of 1324

0.43

0.34

0.0038

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:1319

Oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, and 2-oxoacid dehydrogenase acyltransferase, catalytic domain

9 of 14

2.36

7.46

2.93e-17

CL:1318

Mixed, incl. Oxidoreductase complex, and Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain

10 of 22

2.21

7.25

2.37e-18

CL:1321

Oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, and e3 binding domain

6 of 7

2.48

5.41

1.54e-11

CL:1271

Mixed, incl. Citrate cycle (TCA cycle), and Aldehyde dehydrogenase domain

11 of 66

1.77

4.82

2.93e-17

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map00020

Citrate cycle (TCA cycle)

7 of 25

2.0

4.3

4.93e-11

map01200

Carbon metabolism

8 of 115

1.39

2.19

7.27e-09

map00010

Glycolysis / Gluconeogenesis

4 of 37

1.59

1.69

8.26e-05

map00620

Pyruvate metabolism

4 of 49

1.46

1.48

0.00017

map01120

Microbial metabolism in diverse environments

8 of 255

1.05

1.19

2.17e-06

(more ...)

Reactome Pathways

pathway

description

count in network

strength

signal

false discovery rate

MAP-1222499

Latent infection - Other responses of Mtb to phagocytosis

4 of 47

1.48

1.46

0.00022

MAP-9635486

Infection with Mycobacterium tuberculosis

4 of 94

1.18

0.98

0.0015

MAP-5663205

Infectious disease

4 of 105

1.13

0.94

0.0015

MAP-1643685

Disease

4 of 108

1.12

0.93

0.0015

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:1990204

Oxidoreductase complex

7 of 42

1.77

3.24

2.82e-09

GOCC:0045240

Dihydrolipoyl dehydrogenase complex

3 of 3

2.55

2.41

3.19e-05

GOCC:0045252

Oxoglutarate dehydrogenase complex

2 of 2

2.55

1.46

0.0021

GOCC:0005622

Intracellular

11 of 1295

0.48

0.41

0.00031

GOCC:0005737

Cytoplasm

9 of 978

0.52

0.39

0.0054

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0450

Lipoyl

4 of 4

2.55

3.33

4.85e-07

KW-0324

Glycolysis

2 of 10

1.85

0.78

0.0323

KW-0012

Acyltransferase

3 of 43

1.4

0.74

0.0243

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF00198

2-oxoacid dehydrogenases acyltransferase (catalytic domain)

4 of 4

2.55

3.11

1.32e-06

PF00364

Biotin-requiring enzyme

4 of 6

2.38

2.95

1.98e-06

PF02817

e3 binding domain

3 of 3

2.55

2.26

6.19e-05

PF00676

Dehydrogenase E1 component

2 of 2

2.55

1.21

0.0061

PF02780

Transketolase, C-terminal domain

2 of 3

2.38

1.13

0.0081

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR003016

2-oxo acid dehydrogenase, lipoyl-binding site

4 of 4

2.55

2.92

3.21e-06

IPR001078

2-oxoacid dehydrogenase acyltransferase, catalytic domain

4 of 4

2.55

2.92

3.21e-06

IPR011053

Single hybrid motif

4 of 6

2.38

2.85

3.21e-06

IPR000089

Biotin/lipoyl attachment

4 of 6

2.38

2.85

3.21e-06

IPR023213

Chloramphenicol acetyltransferase-like domain superfamily

4 of 8

2.25

2.72

4.51e-06

(more ...)

Protein Domains (SMART)

domain

description

count in network

strength

signal

false discovery rate

SM00861

Transketolase, pyrimidine binding domain

3 of 4

2.43

2.22

6.66e-05

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