STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U14_05392PilT protein domain protein. (111 aa)    
Predicted Functional Partners:
U14_00336
Hypothetical protein.
   
 
 0.889
U14_01720
Prevent-host-death protein.
   
 
 0.889
U14_05391
Transcriptional regulator, AbrB family.
     
 0.805
U14_03965
L-serine ammonia-lyase; Belongs to the iron-sulfur dependent L-serine dehydratase family.
  
  
  0.600
U14_05393
Hypothetical protein.
       0.535
U14_03832
PilT protein domain protein.
 
   
 0.507
U14_04495
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
   
 0.468
U14_00185
Transcriptional modulator of MazE/toxin, MazF.
 
   
 0.464
trpA
Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
     
 0.463
U14_03682
Hypothetical protein.
 
   
 0.447
Your Current Organism:
Moduliflexus flocculans
NCBI taxonomy Id: 1499966
Other names: C. Moduliflexus flocculans, Candidatus Moduliflexus flocculans, bacterium UASB14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.