STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U14_05481DNA polymerase, beta domain protein region. (110 aa)    
Predicted Functional Partners:
U14_05480
Hypothetical protein.
       0.773
U14_05479
Hypothetical protein.
       0.637
U14_05477
Hypothetical protein Isop_2141.
       0.628
U14_05478
YcfA family protein.
       0.628
U14_05483
Tetratricopeptide repeat domain protein; Fragment.
       0.583
U14_05482
Radical SAM domain protein.
       0.558
U14_02702
3-isopropylmalate dehydrogenase.
  
    0.418
U14_05484
Insertion element protein.
       0.402
Your Current Organism:
Moduliflexus flocculans
NCBI taxonomy Id: 1499966
Other names: C. Moduliflexus flocculans, Candidatus Moduliflexus flocculans, bacterium UASB14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.