STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_00065Putative ABC transporter ATP-binding protein. (252 aa)    
Predicted Functional Partners:
U27_00204
Export ABC transporter permease protein.
 
 0.985
U27_00205
ABC-type transporter.
 
 0.985
U27_00350
ABC-type transporter.
 
 0.973
U27_00812
ABC-type transport system.
 
 0.973
U27_05296
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
 0.973
U27_06635
ABC-type transport system.
  
 
0.951
U27_04028
Hypothetical protein.
  
 
 0.907
U27_04743
Hypothetical protein.
  
 
 0.907
U27_06934
Hypothetical protein.
  
 
 0.907
U27_01835
Putative ATPase related protein; Belongs to the V-ATPase proteolipid subunit family.
   
 
 0.868
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.