STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_001663-hydroxyacyl-CoA dehydrogenase NAD-binding. (296 aa)    
Predicted Functional Partners:
U27_04293
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.998
U27_05049
CrtA2 protein; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.995
U27_05237
Putative enoyl-CoA hydratase.
 
 0.934
U27_05436
propionyl-CoA carboxylase carboxyltransferase subunit.
  
 
 0.845
U27_01904
NcpA protein.
  
  
 0.785
U27_05044
MaoC domain protein dehydratase.
 
 0.778
U27_03390
Amino acid adenylation domain protein.
  
  
 0.751
U27_03387
JamP protein.
  
 0.750
U27_01584
Pyruvate-flavodoxin oxidoreductase.
    
 0.723
U27_05048
Acyl CoA:acetate/3-ketoacid CoA transferase; Belongs to the 3-oxoacid CoA-transferase family.
 
  
 0.717
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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