STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_00352Hypothetical protein. (414 aa)    
Predicted Functional Partners:
U27_00350
ABC-type transporter.
 
    0.952
U27_00351
Bacitracin transport ATP-binding protein BcrA.
 
    0.950
U27_00812
ABC-type transport system.
 
    0.797
U27_00811
ABC-type multidrug transport system, ATPase component.
 
    0.790
U27_02272
Capsular polysaccharide synthesis protein.
    
  0.607
U27_04050
Undecaprenyl-phosphate glucose phosphotransferase.
    
  0.607
U27_07007
Glucosyl-1-phosphate transferase.
    
  0.607
U27_03237
Hypothetical protein GobsU_17960.
    
 0.598
U27_06322
Hypothetical protein.
    
  0.571
U27_04944
Sugar transferase.
 
  
  0.569
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.