STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_00488DinB protein. (165 aa)    
Predicted Functional Partners:
U27_02063
Brp/Blh family beta-carotene 15,15'-monooxygenase.
 
     0.621
U27_04956
Carbohydrate esterase Family 14.
  
   
 0.555
U27_02312
Hypotethical protein.
  
   
 0.553
U27_04274
Uncharacterized protein conserved in bacteria.
  
   
 0.469
U27_01181
GCN5-like N-acetyltransferase.
 
  
 0.435
U27_04593
DinB family protein.
  
     0.426
U27_00489
Hypothetical protein.
       0.417
U27_00490
Hypothetical protein.
       0.417
U27_01781
Hypothetical protein.
  
     0.408
U27_02062
Regulatory protein.
  
     0.407
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.