STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_00724N-6 DNA methylase. (568 aa)    
Predicted Functional Partners:
U27_04284
Type I restriction modification system DNA specificity domain protein, HsdS.
 
 0.995
U27_00716
Restriction endonuclease S subunit.
 
 0.993
U27_00712
Putative type I restriction enzyme R protein.
 
 
 0.991
U27_00828
Type I restriction-modification enzyme S subunit.
 
 0.971
U27_03046
Restriction modification system DNA specificity domain protein.
 
 
 0.966
U27_05788
Restriction modification system DNA specificity subunit.
 
 0.966
U27_03047
Type I site-specific deoxyribonuclease HsdR; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
 
 0.965
U27_00826
Deoxyribonuclease; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
 
 0.964
U27_01716
Putative restriction-modification system specificity determinant.
 
 
 0.963
U27_03346
Restriction modification system DNA specificity subunit.
 
 
 0.962
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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