STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_00745Transketolase subunit A. (272 aa)    
Predicted Functional Partners:
U27_00374
Transketolase central region.
 0.999
U27_00746
Transketolase domain-containing protein.
 0.999
U27_05767
Transketolase.
 0.999
U27_02246
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
 0.992
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
    
 0.770
U27_04935
Fructose-1,6-bisphosphate aldolase, class II.
    
 0.764
U27_02029
Ribose-5-phosphate isomerase.
    
 0.762
U27_02320
Sugar-phosphate isomerase, RpiB/LacA/LacB family.
    
 0.762
U27_02436
Sugar-phosphate isomerase, RpiB/LacA/LacB family.
    
 0.762
U27_06188
Hypothetical protein.
    
 0.753
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.