STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_00868ABC transporter related. (256 aa)    
Predicted Functional Partners:
U27_00867
Inner-membrane translocator 43; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
U27_01173
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.994
U27_02155
High-affinity branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.994
U27_02486
High-affinity branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.994
U27_02749
High-affinity branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.994
U27_00309
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.992
U27_00590
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.992
U27_05866
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.983
U27_00866
High-affinity branched-chain amino acid ABC transporter, Permease; Belongs to the binding-protein-dependent transport system permease family.
 
 0.979
U27_00407
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.968
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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