STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_01109Glutamate dehydrogenase (NAD(P)(+)); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (623 aa)    
Predicted Functional Partners:
U27_06240
Glutamate synthase (Ferredoxin).
  
 0.994
U27_05084
Transketolase central region.
  
 
 0.945
U27_04644
Selenate reductase YgfK.
  
 0.919
U27_01580
2Fe-2S iron-sulfur cluster binding domain protein.
  
 0.901
U27_03912
Putative formate dehydrogenase, alphasubunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 0.901
U27_03919
NADH dehydrogenase, subunit F.
  
 0.897
U27_06241
Glutamate synthase [NADPH] small chain, (NADPH-GOGAT).
  
 0.882
U27_01904
NcpA protein.
  
 0.876
U27_02450
Pyruvate dehydrogenase.
  
 
 0.861
pdhA
Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
  
 
 0.861
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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