STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_01607Probable glycerol-3-phosphate ABC transporter substrate binding protein. (425 aa)    
Predicted Functional Partners:
U27_02815
Binding-protein-dependent transport systems inner membrane component.
 
   0.906
U27_01609
ABC transporter permease protein.
  
   0.905
U27_01610
Binding-protein-dependent transport systems inner membrane component.
 
   0.902
U27_03955
ABC-type sugar transport system, permease component.
 
   0.902
U27_04151
SN-glycerol-3-phosphate transport system permease protein.
 
   0.899
U27_02814
Binding-protein-dependent transport systems inner membrane component.
 
   0.894
U27_02365
SN-glycerol-3-phosphate ABC transporter, permease protein.
  
   0.890
U27_03956
Binding-protein-dependent transport systems inner membrane component.
   0.889
U27_02364
ABC-type transporter, permease component, CUT1 family protein.
 
   0.883
U27_04152
ABC-type sugar transport system, permease component.
 
   0.880
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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