STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_01628Ribose ABC transporter, permease protein, RbsC; Belongs to the binding-protein-dependent transport system permease family. (332 aa)    
Predicted Functional Partners:
U27_01627
Ribose transport ATP-binding protein, RbsA.
 
  0.845
U27_01626
ABC sugar transport periplasmic component.
 
  0.819
U27_06218
Monosaccharide-transporting ATPase.
 
  0.812
U27_02350
D-allose-binding periplasmic protein.
 
  0.741
U27_02555
Periplasmic binding protein and sugar binding domain of the LacI.
 
  0.716
U27_00369
Hypothetical protein.
 
  0.705
U27_06911
Hypothetical protein.
 
  0.695
U27_02432
Periplasmic binding protein/LacI transcriptional regulator.
 
  0.691
rbsD
D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
  
  
 0.680
U27_05945
D-ribose ABC transporter, substrate-binding protein.
 
  0.674
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.