STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_01721Type III restriction protein res subunit. (502 aa)    
Predicted Functional Partners:
U27_04094
N-6 DNA methylase.
 
 
 0.987
U27_01716
Putative restriction-modification system specificity determinant.
 
 
 0.979
U27_01719
N-6 DNA methylase.
 
 
 0.979
U27_03276
Restriction modification system DNA specificity domain.
 
 
 0.972
U27_05788
Restriction modification system DNA specificity subunit.
 
 
 0.972
U27_06882
Restriction modification system DNA specificity domain.
 
 
 0.971
U27_03275
Putative type I restriction-modification system, S subunit.
 
 
 0.960
U27_06880
Site-specific DNA-methyltransferase (Adenine-specific).
 
 
 0.942
U27_03274
Site-specific DNA-methyltransferase (Adenine-specific).
 
 0.941
U27_06879
Site-specific DNA-methyltransferase (Adenine-specific).
 
 
 0.941
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.