STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_01733Transposase and inactivated derivatives-like protein. (218 aa)    
Predicted Functional Partners:
U27_02338
Transposase IS4 family protein.
  
     0.669
U27_01734
Transposase and inactivated derivatives.
  
    0.606
U27_01735
Hypothetical protein.
       0.461
U27_04460
Uncharacterized protein/domain associated with GTPase-like protein.
  
     0.437
U27_00855
PilT-like protein.
   
    0.436
U27_03105
Twitching motility protein PilT.
   
    0.436
U27_03192
Twitching motility protein PilT.
   
    0.436
U27_01732
Tungsten formylmethanofuran dehydrogenase subunit E.
       0.422
U27_05829
Transposase.
  
     0.405
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.