STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_01969Putative permease protein. (175 aa)    
Predicted Functional Partners:
U27_01970
Large permease protein.
  
 0.819
U27_01968
Transporter.
 
  
 0.771
U27_02545
TRAP-type C4-dicarboxylate transport system, small permease component.
  
     0.771
U27_06905
Hypothetical protein.
  
     0.766
U27_03330
DctQ9 protein.
  
     0.762
U27_03802
Tripartite ATP-independent periplasmic transporter DctQ component.
  
     0.761
U27_04577
Tripartite ATP-independent periplasmic transporter DctQ component.
  
     0.761
U27_00741
Tripartite ATP-independent periplasmic transporter DctQ component.
  
     0.757
U27_01222
C4-dicarboxylate transport system permease small protein.
  
     0.751
U27_02862
Putative TRAP dicarboxylate transporter, DctQ subunit.
  
     0.722
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.