STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_02010Ribose import ATP-binding protein RbsA. (498 aa)    
Predicted Functional Partners:
U27_02011
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  0.875
U27_02009
Putative ABC transporter periplasmic sugar-binding protein.
  
  0.773
rbsD
D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
  
  
 0.682
U27_05184
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  0.656
U27_02431
Sugar ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
  0.655
U27_00370
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 
  0.650
U27_00705
Monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
  0.644
U27_00969
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  0.640
U27_04536
Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component.
 
  0.640
U27_05928
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  0.637
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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