STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_02165Hypothetical protein. (337 aa)    
Predicted Functional Partners:
U27_05849
Hypothetical protein.
  
    0.811
U27_00178
Iron-containing alcohol dehydrogenase.
    
   0.795
U27_00357
Iron-containing alcohol dehydrogenase.
    
   0.795
U27_05022
Iron-containing alcohol dehydrogenase.
    
   0.795
U27_02166
Hypothetical protein.
       0.712
U27_04450
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.704
U27_03240
Allophanate hydrolase, subunit 1.
  
  
 0.683
U27_06683
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
    0.670
U27_00620
Aminoacyl-histidine dipeptidase.
  
    0.665
U27_06436
Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
  
    0.665
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.