STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_02295Anti-sigma factor antagonist. (113 aa)    
Predicted Functional Partners:
U27_02296
Protein serine phosphatase with GAF(S) sensor(S).
 
 0.997
U27_06433
Protein serine/threonine phosphatase.
 
 0.994
U27_02297
Putative anti-sigma regulatory factor, serine/threonine protein kinase.
 
 0.992
U27_06162
Putative anti-sigma regulatory factor, serine/threonine protein kinase.
 
 0.986
U27_04367
Response regulator receiver protein.
  
 0.977
U27_04437
Hypothetical protein GobsU_23182.
  
 0.977
U27_06431
Anti-sigma factor antagonist.
 
 0.976
U27_03927
Hypothetical protein ANT_17740.
  
 0.968
U27_04991
Putative anti-sigma regulatory factor, serine/threonine protein kinase.
  
 0.966
U27_06783
Anti-sigma factor antagonist.
  
 0.966
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.