STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_02398Aldehyde ferredoxin oxidoreductase. (601 aa)    
Predicted Functional Partners:
U27_05779
Formate dehydrogenase, beta subunit.
 0.978
U27_05765
Ferredoxin-type protein.
   
 
 0.906
U27_00478
Extracellular solute-binding protein, family 1.
 
   
 0.792
U27_00477
Binding-protein-dependent transport systems inner membrane component.
 
   
 0.736
U27_05673
DNA binding domain protein, excisionase family.
 
     0.647
moaC
Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
  
  
 0.645
U27_06705
Alpha-ribazole phosphatase; Belongs to the phosphoglycerate mutase family.
    
  0.581
pgk
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
 0.565
U27_00281
Glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
    
 0.537
U27_05291
Glyceraldehyde-3-phosphate dehydrogenase (Phosphorylating); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
    
 0.537
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.