STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_02412relE-like Cytotoxic translational repressor of toxin-antitoxin stability system. (110 aa)    
Predicted Functional Partners:
U27_02411
Transcriptional regulator, XRE family.
 
 
 
 0.988
U27_05642
Protein containing DUF172; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
 
 
 0.934
U27_05787
Transcriptional regulator, XRE family.
 
 
 
 0.924
U27_04043
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
 
 
 0.922
U27_04706
Hypothetical protein.
   
 
 0.902
U27_00722
Toxin-antitoxin system, toxin component, RelE family.
  
     0.774
U27_02413
Hypothetical protein.
       0.556
U27_04649
Toxin of toxin-antitoxin system VapC.
 
   
 0.420
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.