STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_02670Conserved domain protein. (171 aa)    
Predicted Functional Partners:
U27_03351
Response regulator receiver domain protein.
  
     0.717
U27_02669
Phenazine biosynthesis protein PhzF family.
       0.686
U27_03352
Bacterial extracellular solute-binding protein, family 7.
  
     0.676
U27_02671
4Fe-4S ferredoxin iron-sulfur binding domain protein.
       0.661
U27_04288
Tripartite ATP-independent periplasmic transporter, DctQ component family protein.
  
     0.593
U27_01021
UDP-glucose/GDP-mannose dehydrogenase.
  
     0.551
U27_02667
Hypothetical protein ANT_23630.
       0.547
U27_02668
GCN5-related N-acetyltransferase.
       0.547
U27_03901
CoB--CoM heterodisulfide reductase.
  
     0.539
U27_03353
TRAP transporter, DctQ-like membrane protein.
  
     0.513
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.