STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_02681Methyltransferase FkbM family. (294 aa)    
Predicted Functional Partners:
U27_02682
Glycosyl transferase group 1.
       0.773
U27_02683
Glycosyl transferase family 39.
       0.768
U27_02680
Fe-S oxidoreductase.
  
  
 0.710
U27_02679
Glycosyl transferase, group 1.
       0.701
U27_00191
Uroporphyrinogen III synthase/methyltransferase.
  
  
 0.691
U27_00189
Siroheme synthase.
    
 0.687
U27_02684
Hypothetical protein.
       0.664
U27_02685
Methyltransferase type 11.
       0.663
U27_02641
Cobalamin/vitamin B12 biosynthesis CbiM protein.
  
 
 0.610
U27_02516
Anaerobic cobalt chelatase.
  
  
 0.594
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.