STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_02814Binding-protein-dependent transport systems inner membrane component. (376 aa)    
Predicted Functional Partners:
U27_06556
Extracellular solute-binding protein family 1.
 
 0.975
U27_06558
Binding-protein-dependent transport systems inner membrane component.
 
 0.975
U27_02941
Extracellular solute-binding protein family 1.
  
 0.972
U27_02815
Binding-protein-dependent transport systems inner membrane component.
  0.959
U27_02813
Extracellular solute-binding protein family 1.
   0.954
U27_04151
SN-glycerol-3-phosphate transport system permease protein.
  0.920
U27_06142
Binding-protein-dependent transport systems inner membrane component.
  0.919
U27_06849
ABC transporter, permease protein.
  0.919
U27_05649
Binding-protein-dependent transport systems inner membrane component.
 
  0.918
U27_06825
Sugar ABC transporter, permease-like protein.
  0.918
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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