Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
U27_00024 | U27_00752 | U27_00024 | U27_00752 | Methionine gamma-lyase. | Methionine synthase. | 0.630 |
U27_00024 | U27_01345 | U27_00024 | U27_01345 | Methionine gamma-lyase. | Homoserine dehydrogenase. | 0.888 |
U27_00024 | U27_01708 | U27_00024 | U27_01708 | Methionine gamma-lyase. | Methionine synthase. | 0.630 |
U27_00024 | U27_01709 | U27_00024 | U27_01709 | Methionine gamma-lyase. | Methionine synthase. | 0.630 |
U27_00024 | U27_02828 | U27_00024 | U27_02828 | Methionine gamma-lyase. | Methylenetetrahydrofolate reductase. | 0.964 |
U27_00024 | U27_03080 | U27_00024 | U27_03080 | Methionine gamma-lyase. | Vitamin B12 dependent methionine synthase, activation domain protein. | 0.630 |
U27_00024 | metK | U27_00024 | U27_01507 | Methionine gamma-lyase. | S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.744 |
U27_00752 | U27_00024 | U27_00752 | U27_00024 | Methionine synthase. | Methionine gamma-lyase. | 0.630 |
U27_00752 | U27_01345 | U27_00752 | U27_01345 | Methionine synthase. | Homoserine dehydrogenase. | 0.767 |
U27_00752 | U27_01632 | U27_00752 | U27_01632 | Methionine synthase. | Cystathionine gamma-synthase. | 0.630 |
U27_00752 | U27_01708 | U27_00752 | U27_01708 | Methionine synthase. | Methionine synthase. | 0.855 |
U27_00752 | U27_01713 | U27_00752 | U27_01713 | Methionine synthase. | Cobalamin B12-binding. | 0.953 |
U27_00752 | U27_02828 | U27_00752 | U27_02828 | Methionine synthase. | Methylenetetrahydrofolate reductase. | 0.987 |
U27_00752 | U27_04771 | U27_00752 | U27_04771 | Methionine synthase. | Cobalamin B12-binding domain protein. | 0.973 |
U27_00752 | metK | U27_00752 | U27_01507 | Methionine synthase. | S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.619 |
U27_01345 | U27_00024 | U27_01345 | U27_00024 | Homoserine dehydrogenase. | Methionine gamma-lyase. | 0.888 |
U27_01345 | U27_00752 | U27_01345 | U27_00752 | Homoserine dehydrogenase. | Methionine synthase. | 0.767 |
U27_01345 | U27_01632 | U27_01345 | U27_01632 | Homoserine dehydrogenase. | Cystathionine gamma-synthase. | 0.887 |
U27_01345 | U27_01708 | U27_01345 | U27_01708 | Homoserine dehydrogenase. | Methionine synthase. | 0.767 |
U27_01345 | U27_01709 | U27_01345 | U27_01709 | Homoserine dehydrogenase. | Methionine synthase. | 0.767 |
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