STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_02854Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (301 aa)    
Predicted Functional Partners:
ldh
L-lactate dehydrogenase 1; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
  
    0.824
U27_02853
Phosphoesterase RecJ domain protein.
       0.773
cmk
Cytidylate kinase.
  
    0.656
U27_02855
Putative membrane protein.
       0.655
U27_02233
Glycosyl hydrolase, family 38.
   
    0.631
U27_02237
Hypothetical protein.
   
    0.631
U27_02852
Na+/Ca+ antiporter, CaCA family.
     
 0.616
U27_04594
Putative cadmium-transporting P-type ATPase.
 
 
 0.535
U27_01706
Metallo-beta-lactamase domain protein, putative.
  
 
  0.500
U27_02807
Beta-lactamase domain protein.
  
 
  0.500
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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